164 search results - page 14 / 33 » Multiple structure alignment and consensus identification fo... |
119
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BMCBI
2002
14 years 9 months ago
2002
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
BMCBI
2008
14 years 9 months ago
2008
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
101
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ALMOB
2008
14 years 10 months ago
2008
Background: Identification of homologous regions or conserved syntenies across genomes is one crucial step in comparative genomics. This task is usually performed by genome alignm...
JCB
2000
14 years 9 months ago
2000
Multiple sequence alignments (MSAs) are frequently used in the study of families of protein sequences or DNA/RNA sequences. They are a fundamental tool for the understanding of th...
BIBE
2007
IEEE
15 years 4 months ago
2007
IEEE
Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...