To address the problem of performing long time simulations of biochemical pathways under in vivo cellular conditions, we have developed a lattice-based, reaction-diffusion model t...
Elijah Roberts, John E. Stone, Leonardo Sepulveda,...
In this paper, we present efficient methods for multidimensional array redistribution. Based on the previous work, the basic-cycle calculation technique, we present a basic-block ...
On Chip Multiprocessors (CMP), it is common that multiple cores share certain levels of cache. The sharing increases the contention in cache and memory-to-chip bandwidth, further h...
Yunlian Jiang, Eddy Z. Zhang, Kai Tian, Xipeng She...
The Numerical Propulsion System Simulation (NPSS) project has been initiated by NASA to explore the use of computer simulation in the development of new aircraft propulsion techno...
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...