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BMCBI
2006
123views more  BMCBI 2006»
14 years 10 months ago
SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology
Background: The biological information in genomic expression data can be understood, and computationally extracted, in the context of systems of interacting molecules. The automat...
Bruz Marzolf, Eric W. Deutsch, Patrick Moss, David...
TCBB
2010
96views more  TCBB 2010»
14 years 4 months ago
A Survey of Spatial Defects in Homo Sapiens Affymetrix GeneChips
Modern biology has moved from a science of individual measurements to a science where data are collected on an industrial scale. Foremost, among the new tools for biochemistry are ...
William B. Langdon, Graham J. G. Upton, Renata da ...
CBMS
2007
IEEE
15 years 4 months ago
An Unsupervised and Fully-Automated Image Analysis Method for cDNA Microarrays
Microarray gene expression image analysis is a labor-intensive task and requires human intervention since microarray images are contaminated with noise and artifacts while spots a...
Eleni Zacharia, Dimitrios E. Maroulis
BMCBI
2005
120views more  BMCBI 2005»
14 years 9 months ago
A microarray study of MPP+-treated PC12 Cells: Mechanisms of toxicity (MOT) analysis using bioinformatics tools
Background: This paper describes a microarray study including data quality control, data analysis and the analysis of the mechanism of toxicity (MOT) induced by 1-methyl-4-phenylp...
Zengjun Xu, Tucker A. Patterson, Jonathan D. Wren,...
COCOA
2009
Springer
15 years 2 months ago
Linear Coherent Bi-cluster Discovery via Line Detection and Sample Majority Voting
Discovering groups of genes that share common expression profiles is an important problem in DNA microarray analysis. Unfortunately, standard bi-clustering algorithms often fail t...
Yi Shi, Zhipeng Cai, Guohui Lin, Dale Schuurmans