In this study, we propose a novel evolutionary algorithm-based clustering method, named density-sensitive evolutionary clustering (DSEC). In DSEC, each individual is a sequence of ...
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
Steven David Prestwich, Desmond G. Higgins, Orla O...
This paper studies how to incorporate side information (such as users’ feedback) in measuring node proximity on large graphs. Our method (ProSIN) is motivated by the well-studie...
Background: The problem of protein structure prediction consists of predicting the functional or native structure of a protein given its linear sequence of amino acids. This probl...
The World Wide Web is growing at such a pace that even the biggest centralized search engines are able to index only a small part of the available documents on the Internet. The d...