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AINA
2006
IEEE
15 years 8 months ago
Accelerating HMMer searches on Opteron processors with minimally invasive recoding
HMMer is a widely used tool for protein sequence homology detection, as well as functional annotation of homologous protein sequences, and protein family classification. The HMMer...
Joseph I. Landman, Joydeep Ray, John Paul Walters
CODES
2001
IEEE
15 years 8 months ago
A trace transformation technique for communication refinement
Models of computation like Kahn and dataflow process networks provide convenient means for modeling signal processing applicahis is partly due to the abstract primitives that thes...
Paul Lieverse, Pieter van der Wolf, Ed F. Deprette...
DAGSTUHL
2006
15 years 6 months ago
Coxeter Lattice Paths
Supercomputing applications usually involve the repeated parallel application of discretized differential operators. Difficulties arise with higher-order discretizations their com...
Thomas J. Ashby, Anthony D. Kennedy, Stephen M. Wa...
ATAL
2003
Springer
15 years 10 months ago
Distributing the control of a temporal network among multiple agents
Agents collaborating on a set of tasks subject to temporal constraints must coordinate their activities to ensure that all of the temporal constraints are ultimately satisfied. S...
Luke Hunsberger
IPSN
2010
Springer
15 years 11 months ago
Covering space for in-network sensor data storage
For in-network storage schemes, one maps data, indexed in a logical space, to the distributed sensor locations. When the physical sensor network has an irregular shape and possibl...
Rik Sarkar, Wei Zeng, Jie Gao, Xianfeng David Gu