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» Neural methods for non-standard data
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BMCBI
2007
153views more  BMCBI 2007»
14 years 9 months ago
A new pairwise kernel for biological network inference with support vector machines
Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
74
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BMCBI
2006
159views more  BMCBI 2006»
14 years 9 months ago
Prediction of protein continuum secondary structure with probabilistic models based on NMR solved structures
Background: The structure of proteins may change as a result of the inherent flexibility of some protein regions. We develop and explore probabilistic machine learning methods for...
Mikael Bodén, Zheng Yuan, Timothy L. Bailey
ICANN
2005
Springer
15 years 3 months ago
Handwritten Digit Recognition with Nonlinear Fisher Discriminant Analysis
Abstract. To generalize the Fisher Discriminant Analysis (FDA) algorithm to the case of discriminant functions belonging to a nonlinear, finite dimensional function space F (Nonli...
Pietro Berkes
IJCNN
2007
IEEE
15 years 3 months ago
Generalised Kernel Machines
Abstract— The generalised linear model (GLM) is the standard approach in classical statistics for regression tasks where it is appropriate to measure the data misfit using a lik...
Gavin C. Cawley, Gareth J. Janacek, Nicola L. C. T...
BMCBI
2007
136views more  BMCBI 2007»
14 years 9 months ago
Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
Xiaoyu Chen, Mathieu Blanchette