Sciweavers

890 search results - page 17 / 178
» New Approaches to Compare Phylogenetic Search Heuristics
Sort
View
ECMDAFA
2010
Springer
228views Hardware» more  ECMDAFA 2010»
15 years 5 months ago
Example-Based Sequence Diagrams to Colored Petri Nets Transformation Using Heuristic Search
Dynamic UML models like sequence diagrams (SD) lack sufficient formal semantics, making it difficult to build automated tools for their analysis, simulation and validation. A commo...
Marouane Kessentini, Arbi Bouchoucha, Houari A. Sa...
BMCBI
2010
101views more  BMCBI 2010»
15 years 1 months ago
Hidden Markov model speed heuristic and iterative HMM search procedure
Background: Profile hidden Markov models (profile-HMMs) are sensitive tools for remote protein homology detection, but the main scoring algorithms, Viterbi or Forward, require con...
L. Steven Johnson, Sean R. Eddy, Elon Portugaly
143
Voted
BMCBI
2005
97views more  BMCBI 2005»
15 years 1 months ago
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
Roald Rossnes, Ingvar Eidhammer, David A. Liberles
HEURISTICS
2010
14 years 11 months ago
A shift sequence based approach for nurse scheduling and a new benchmark dataset
This paper investigates an adaptive constructive method for solving nurse rostering problems. The constraints considered in the problems are categorised into three classes: those t...
Peter Brucker, Edmund K. Burke, Timothy Curtois, R...
CGF
2010
146views more  CGF 2010»
15 years 1 months ago
Pathline: A Tool For Comparative Functional Genomics
Biologists pioneering the new field of comparative functional genomics attempt to infer the mechanisms of gene regulation by looking for similarities and differences of gene activ...
Miriah D. Meyer, Bang Wong, Mark P. Styczynski, Ta...