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» New Approaches to Compare Phylogenetic Search Heuristics
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HICSS
1997
IEEE
107views Biometrics» more  HICSS 1997»
15 years 6 months ago
On Heuristic Mapping of Decision Surfaces for Post-Evaluation Analysis
The value for decision making of high-quality postsolution analysis of decision-supporting models can hardly be overestimated. Candle-lighting analysis (CLA) takes this notion ver...
Major Bill Branley, Russell Fradin, Steven O. Kimb...
RECOMB
2001
Springer
16 years 2 months ago
Algorithms for phylogenetic footprinting
Phylogenetic footprinting is a comparative genomics approach for predicting transcription factor binding sites, where a set of orthologous regulatory regions are compared and short...
Mathieu Blanchette
ISPD
2009
ACM
126views Hardware» more  ISPD 2009»
15 years 8 months ago
A new algorithm for simultaneous gate sizing and threshold voltage assignment
Gate sizing and threshold voltage (Vt) assignment are popular techniques for circuit timing and power optimization. Existing methods, by and large, are either sensitivity-driven h...
Yifang Liu, Jiang Hu
GECCO
2004
Springer
117views Optimization» more  GECCO 2004»
15 years 7 months ago
Comparing Search Algorithms for the Temperature Inversion Problem
Several inverse problems exist in the atmospheric sciences that are computationally costly when using traditional gradient based methods. Unfortunately, many standard evolutionary ...
Monte Lunacek, L. Darrell Whitley, Philip Gabriel,...
144
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JCB
2006
124views more  JCB 2006»
15 years 1 months ago
The Average Common Substring Approach to Phylogenomic Reconstruction
We describe a novel method for efficient reconstruction of phylogenetic trees, based on sequences of whole genomes or proteomes, whose lengths may greatly vary. The core of our me...
Igor Ulitsky, David Burstein, Tamir Tuller, Benny ...