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BMCBI
2007
148views more  BMCBI 2007»
14 years 9 months ago
Blast sampling for structural and functional analyses
Background: The post-genomic era is characterised by a torrent of biological information flooding the public databases. As a direct consequence, similarity searches starting with ...
Anne Friedrich, Raymond Ripp, Nicolas Garnier, Emm...
92
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PPSN
2004
Springer
15 years 2 months ago
LS-CMA-ES: A Second-Order Algorithm for Covariance Matrix Adaptation
Abstract. Evolution Strategies, Evolutionary Algorithms based on Gaussian mutation and deterministic selection, are today considered the best choice as far as parameter optimizatio...
Anne Auger, Marc Schoenauer, Nicolas Vanhaecke
SDM
2010
SIAM
165views Data Mining» more  SDM 2010»
14 years 11 months ago
Direct Density Ratio Estimation with Dimensionality Reduction
Methods for directly estimating the ratio of two probability density functions without going through density estimation have been actively explored recently since they can be used...
Masashi Sugiyama, Satoshi Hara, Paul von Büna...
BMCBI
2008
166views more  BMCBI 2008»
14 years 9 months ago
Learning transcriptional regulatory networks from high throughput gene expression data using continuous three-way mutual informa
Background: Probability based statistical learning methods such as mutual information and Bayesian networks have emerged as a major category of tools for reverse engineering mecha...
Weijun Luo, Kurt D. Hankenson, Peter J. Woolf
BMCBI
2010
190views more  BMCBI 2010»
14 years 9 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...