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» New algorithms for efficient parallel string comparison
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TCS
2008
14 years 11 months ago
Algorithms for computing variants of the longest common subsequence problem
The longest common subsequence(LCS) problem is one of the classical and wellstudied problems in computer science. The computation of the LCS is a frequent task in DNA sequence ana...
Costas S. Iliopoulos, M. Sohel Rahman
BMCBI
2008
130views more  BMCBI 2008»
14 years 12 months ago
An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories
Background: Understanding how proteins fold is essential to our quest in discovering how life works at the molecular level. Current computation power enables researchers to produc...
Hong Sun, Hakan Ferhatosmanoglu, Motonori Ota, Yus...
CORR
2007
Springer
141views Education» more  CORR 2007»
14 years 11 months ago
A Class of Parallel Tiled Linear Algebra Algorithms for Multicore Architectures
As multicore systems continue to gain ground in the High Performance Computing world, linear algebra algorithms have to be reformulated or new algorithms have to be developed in or...
Alfredo Buttari, Julien Langou, Jakub Kurzak, Jack...
IPPS
1999
IEEE
15 years 4 months ago
An Efficient Logging Algorithm for Incremental Replay of Message
To support incremental replay of message-passing applications, processes must periodically checkpoint and the content of some messages must be logged, to break dependencies of the...
Franco Zambonelli
CEC
2008
IEEE
15 years 6 months ago
A parallel surrogate-assisted multi-objective evolutionary algorithm for computationally expensive optimization problems
Abstract— This paper presents a new efficient multiobjective evolutionary algorithm for solving computationallyintensive optimization problems. To support a high degree of parall...
Anna Syberfeldt, Henrik Grimm, Amos Ng, Robert Ivo...