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» New analysis and results for the Frank-Wolfe method
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BMCBI
2007
144views more  BMCBI 2007»
15 years 1 months ago
Spectral estimation in unevenly sampled space of periodically expressed microarray time series data
Background: Periodogram analysis of time-series is widespread in biology. A new challenge for analyzing the microarray time series data is to identify genes that are periodically ...
Alan Wee-Chung Liew, Jun Xian, Shuanhu Wu, David K...
CLEF
2006
Springer
15 years 5 months ago
A Penalisation-Based Ranking Approach for the Mixed Monolingual Task of WebCLEF 2006
This paper presents an approach of a cross-lingual information retrieval which uses a ranking method based on a penalisation version of the Jaccard formula. The obtained results a...
David Pinto, Paolo Rosso, Ernesto Jiménez
BMCBI
2011
14 years 8 months ago
Sequential Interim Analyses of Survival Data in DNA Microarray Experiments
Background: Discovery of biomarkers that are correlated with therapy response and thus with survival is an important goal of medical research on severe diseases, e.g. cancer. Freq...
Andreas Leha, Tim Beißbarth, Klaus Jung
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ALMOB
2007
155views more  ALMOB 2007»
15 years 1 months ago
Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid rep
Background: Some amino acid residues functionally interact with each other. This interaction will result in an evolutionary co-variation between these residues – coevolution. Ou...
Rodrigo Gouveia-Oliveira, Anders Gorm Pedersen
BMCBI
2007
112views more  BMCBI 2007»
15 years 1 months ago
Selecting dissimilar genes for multi-class classification, an application in cancer subtyping
Background: Gene expression microarray is a powerful technology for genetic profiling diseases and their associated treatments. Such a process involves a key step of biomarker ide...
Zhipeng Cai, Randy Goebel, Mohammad R. Salavatipou...