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96
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JCSS
2008
80views more  JCSS 2008»
15 years 23 days ago
Improved bounds on sorting by length-weighted reversals
We study the problem of sorting binary sequences and permutations by length-weighted reversals. We consider a wide class of cost functions, namely f( ) = for all 0, where is the...
Michael A. Bender, Dongdong Ge, Simai He, Haodong ...
COMBINATORICS
1998
80views more  COMBINATORICS 1998»
15 years 15 days ago
Periodic Sorting Using Minimum Delay, Recursively Constructed Merging Networks
Let α and β be a partition of {1, . . . , n} into two blocks. A merging network is a network of comparators which allows as input arbitrary real numbers and has the property tha...
Edward A. Bender, S. Gill Williamson
107
Voted
JDA
2008
122views more  JDA 2008»
15 years 9 days ago
An approximation algorithm for sorting by reversals and transpositions
Abstract. Genome rearrangement algorithms are powerful tools to analyze gene orders in molecular evolution. Analysis of genomes evolving by reversals and transpositions leads to a ...
Atif Rahman, Swakkhar Shatabda, Masud Hasan
CORR
2010
Springer
120views Education» more  CORR 2010»
14 years 7 months ago
LRM-Trees: Compressed Indices, Adaptive Sorting, and Compressed Permutations
LRM-Trees are an elegant way to partition a sequence of values into sorted consecutive blocks, and to express the relative position of the first element of each block within a prev...
Jérémy Barbay, Johannes Fischer
94
Voted
ICCD
2002
IEEE
128views Hardware» more  ICCD 2002»
15 years 9 months ago
Subword Sorting with Versatile Permutation Instructions
Subword parallelism has succeeded in accelerating many multimedia applications. Subword permutation instructions have been proposed to efficiently rearrange subwords in or among r...
Zhijie Shi, Ruby B. Lee