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BMCBI
2006
124views more  BMCBI 2006»
15 years 19 days ago
Predicting transcription factor binding sites using local over-representation and comparative genomics
Background: Identifying cis-regulatory elements is crucial to understanding gene expression, which highlights the importance of the computational detection of overrepresented tran...
Matthieu Defrance, Hélène Touzet
CVPR
2008
IEEE
16 years 2 months ago
Interactive image segmentation via minimization of quadratic energies on directed graphs
We propose a scheme to introduce directionality in the Random Walker algorithm for image segmentation. In particular, we extend the optimization framework of this algorithm to com...
Dheeraj Singaraju, Leo Grady, René Vidal
127
Voted
BMCBI
2006
175views more  BMCBI 2006»
15 years 19 days ago
Parameter estimation for stiff equations of biosystems using radial basis function networks
Background: The modeling of dynamic systems requires estimating kinetic parameters from experimentally measured time-courses. Conventional global optimization methods used for par...
Yoshiya Matsubara, Shinichi Kikuchi, Masahiro Sugi...
110
Voted
PR
2006
141views more  PR 2006»
15 years 15 days ago
Relaxational metric adaptation and its application to semi-supervised clustering and content-based image retrieval
The performance of many supervised and unsupervised learning algorithms is very sensitive to the choice of an appropriate distance metric. Previous work in metric learning and ada...
Hong Chang, Dit-Yan Yeung, William K. Cheung
163
Voted
BMCBI
2011
14 years 4 months ago
Study of large and highly stratified population datasets by combining iterative pruning principal component analysis and STRUCTU
Background: The ever increasing sizes of population genetic datasets pose great challenges for population structure analysis. The Tracy-Widom (TW) statistical test is widely used ...
Tulaya Limpiti, Apichart Intarapanich, Anunchai As...