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BMCBI
2010
143views more  BMCBI 2010»
15 years 22 days ago
An efficient biological pathway layout algorithm combining grid-layout and spring embedder for complicated cellular location inf
Background: Graph drawing is one of the important techniques for understanding biological regulations in a cell or among cells at the pathway level. Among many available layout al...
Kaname Kojima, Masao Nagasaki, Satoru Miyano
106
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ICIP
1999
IEEE
16 years 2 months ago
Color Documents on the Web with DJVU
We present a new image compression technique called DjVu" that is speci cally geared towards the compression of scanned documents in color at high resolution. With DjVu, a ma...
Bill Riemers, Léon Bottou, Pascal Vincent, ...
BMCBI
2010
101views more  BMCBI 2010»
15 years 22 days ago
Hidden Markov model speed heuristic and iterative HMM search procedure
Background: Profile hidden Markov models (profile-HMMs) are sensitive tools for remote protein homology detection, but the main scoring algorithms, Viterbi or Forward, require con...
L. Steven Johnson, Sean R. Eddy, Elon Portugaly
BMCBI
2010
135views more  BMCBI 2010»
15 years 22 days ago
GIGA: a simple, efficient algorithm for gene tree inference in the genomic age
Background: Phylogenetic relationships between genes are not only of theoretical interest: they enable us to learn about human genes through the experimental work on their relativ...
Paul D. Thomas
104
Voted
BMCBI
2006
120views more  BMCBI 2006»
15 years 20 days ago
A factor analysis model for functional genomics
Background: Expression array data are used to predict biological functions of uncharacterized genes by comparing their expression profiles to those of characterized genes. While b...
Rafal Kustra, Romy Shioda, Mu Zhu