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147
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WABI
2010
Springer
167views Bioinformatics» more  WABI 2010»
15 years 1 months ago
Quantifying the Strength of Natural Selection of a Motif Sequence
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
Chen-Hsiang Yeang
ICPR
2006
IEEE
16 years 4 months ago
Online Learning of Discriminative Patterns from Unlimited Sequences of Candidates
Recent research in object recognition has demonstrated the advantages of representing objects and scenes through localized patterns such as small image templates. In this paper we...
Ilkka Autio, Jussi T. Lindgren
VLSID
2002
IEEE
106views VLSI» more  VLSID 2002»
16 years 3 months ago
SWASAD: An ASIC Design for High Speed DNA Sequence Matching
This paper presents the Smith and Waterman Algorithm-Specific ASIC Design (SWASAD) project. This is a hardware solution that implements the S&W algorithm.. The SWASAD is an imp...
Tony Han, Sri Parameswaran
129
Voted
RECOMB
2006
Springer
16 years 3 months ago
Evolution of Tandemly Repeated Sequences Through Duplication and Inversion
Abstract. Given a phylogenetic tree T for a family of tandemly repeated genes and their signed order O on the chromosome, we aim to find the minimum number of inversions compatible...
Denis Bertrand, Mathieu Lajoie, Nadia El-Mabrouk, ...
ADMI
2009
Springer
15 years 10 months ago
A Sequence Mining Method to Predict the Bidding Strategy of Trading Agents
Abstract. In this work, we describe the process used in order to predict the bidding strategy of trading agents. This was done in the context of the Reverse TAC, or CAT, game of th...
Vivia Nikolaidou, Pericles A. Mitkas