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» OLAP on sequence data
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127
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BMCBI
2008
110views more  BMCBI 2008»
15 years 3 months ago
Determining significance of pairwise co-occurrences of events in bursty sequences
Background: Event sequences where different types of events often occur close together arise, e.g., when studying potential transcription factor binding sites (TFBS, events) of ce...
Niina Haiminen, Heikki Mannila, Evimaria Terzi
115
Voted
BMCBI
2008
154views more  BMCBI 2008»
15 years 3 months ago
GenomeMatcher: A graphical user interface for DNA sequence comparison
Background: The number of available genome sequences is increasing, and easy-to-use software that enables efficient comparative analysis is needed. Results: We developed GenomeMat...
Yoshiyuki Ohtsubo, Wakako Ikeda-Ohtsubo, Yuji Naga...
BMCBI
2004
87views more  BMCBI 2004»
15 years 3 months ago
prot4EST: Translating Expressed Sequence Tags from neglected genomes
Background: The genomes of an increasing number of species are being investigated through generation of expressed sequence tags (ESTs). However, ESTs are prone to sequencing error...
James Wasmuth, Mark L. Blaxter
167
Voted
ICDE
2009
IEEE
173views Database» more  ICDE 2009»
15 years 1 months ago
Efficient Mining of Closed Repetitive Gapped Subsequences from a Sequence Database
There is a huge wealth of sequence data available, for example, customer purchase histories, program execution traces, DNA, and protein sequences. Analyzing this wealth of data to ...
Bolin Ding, David Lo, Jiawei Han, Siau-Cheng Khoo
ICDM
2008
IEEE
130views Data Mining» more  ICDM 2008»
15 years 10 months ago
Mining Temporal Patterns with Quantitative Intervals
In this paper we consider the problem of discovering frequent temporal patterns in a database of temporal sequences, where a temporal sequence is a set of items with associated da...
Thomas Guyet, Rene Quiniou