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» OLAP on sequence data
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92
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ORL
2007
66views more  ORL 2007»
15 years 3 months ago
Linear programming with online learning
We propose online decision strategies for time-dependent sequences of linear programs which use no distributional and minimal geometric assumptions about the data. These strategies...
Tatsiana Levina, Yuri Levin, Jeff McGill, Mikhail ...
136
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APWEB
2006
Springer
15 years 7 months ago
Efficient Mining Strategy for Frequent Serial Episodes in Temporal Database
Discovering patterns with great significance is an important problem in data mining discipline. A serial episode is defined to be a partially ordered set of events for consecutive ...
Kuo-Yu Huang, Chia-Hui Chang
CSIE
2009
IEEE
15 years 10 months ago
Identifying DNA Strands Using a Kernel of Classified Sequences
— Automated DNA sequencing produces a large amount of raw DNA sequence data that then needs to be classified, organized, and annotation. One major application is the comparison o...
Guillermo Tonsmann, David D. Pollock, Wanjun Gu, T...
109
Voted
BMCBI
2010
103views more  BMCBI 2010»
15 years 3 months ago
MTRAP: Pairwise sequence alignment algorithm by a new measure based on transition probability between two consecutive pairs of r
Background: Sequence alignment is one of the most important techniques to analyze biological systems. It is also true that the alignment is not complete and we have to develop it ...
Toshihide Hara, Keiko Sato, Masanori Ohya
BMCBI
2002
137views more  BMCBI 2002»
15 years 3 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert