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LCTRTS
2005
Springer
15 years 9 months ago
A dictionary construction technique for code compression systems with echo instructions
Dictionary compression mechanisms identify redundant sequences of instructions that occur in a program. The sequences are extracted and copied to a dictionary. Each sequence is th...
Philip Brisk, Jamie Macbeth, Ani Nahapetian, Majid...
SAC
2003
ACM
15 years 9 months ago
Similar_Join: Extending DBMS with a Bio-specific Operator
Existing sequence comparison software applications lack automation, abstraction, performance, and flexibility. Users need a new way of studying and applying sequence comparisons i...
Jake Yue Chen, John V. Carlis
BMCBI
2008
116views more  BMCBI 2008»
15 years 4 months ago
GBParsy: A GenBank flatfile parser library with high speed
Background: GenBank flatfile (GBF) format is one of the most popular sequence file formats because of its detailed sequence features and ease of readability. To use the data in th...
Tae-Ho Lee, Yeon-Ki Kim, Baek Hie Nahm
NAR
1998
94views more  NAR 1998»
15 years 3 months ago
SGD: Saccharomyces Genome Database
The Saccharomyces Genome Database (SGD) provides Internet access to the complete Saccharomyces cerevisiae genomic sequence, its genes and their products, the phenotypes of its mut...
J. Michael Cherry, Caroline Adler, Catherine A. Ba...
BMCBI
2006
143views more  BMCBI 2006»
15 years 4 months ago
IsoSVM - Distinguishing isoforms and paralogs on the protein level
Background: Recent progress in cDNA and EST sequencing is yielding a deluge of sequence data. Like database search results and proteome databases, this data gives rise to inferred...
Michael Spitzer, Stefan Lorkowski, Paul Cullen, Al...