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127
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ALGORITHMICA
2007
89views more  ALGORITHMICA 2007»
15 years 3 months ago
The Complexity of the Single Individual SNP Haplotyping Problem
— We present several new results pertaining to haplotyping. These results concern the combinatorial problem of reconstructing haplotypes from incomplete and/or imperfectly sequen...
Rudi Cilibrasi, Leo van Iersel, Steven Kelk, John ...
135
Voted
BMCBI
2010
109views more  BMCBI 2010»
15 years 3 months ago
FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods
Background: Likelihood (ML)-based phylogenetic inference has become a popular method for estimating the evolutionary relationships among species based on genomic sequence data. Th...
Stephanie Zierke, Jason D. Bakos
98
Voted
BMCBI
2010
99views more  BMCBI 2010»
15 years 3 months ago
Assignment of chromosomal locations for unassigned SNPs/scaffolds based on pair-wise linkage disequilibrium estimates
Background: Recent developments of high-density SNP chips across a number of species require accurate genetic maps. Despite rapid advances in genome sequence assembly and availabi...
Mehar S. Khatkar, Matthew Hobbs, Markus Neuditschk...
133
Voted
BMCBI
2010
120views more  BMCBI 2010»
15 years 3 months ago
AntiBP2: improved version of antibacterial peptide prediction
Background: Antibacterial peptides are one of the effecter molecules of innate immune system. Over the last few decades several antibacterial peptides have successfully approved a...
Sneh Lata, Nitish K. Mishra, Gajendra P. S. Raghav...
116
Voted
CORR
2010
Springer
141views Education» more  CORR 2010»
15 years 3 months ago
FPGA Implementation of LS Code Generator for CDM Based MIMO Channel Sounder
MIMO (Multi Input Multi Output) wireless communication system is an innovative solution to improve the bandwidth efficiency by exploiting multipath-richness of the propagation envi...
M. Habib Ullah, Md. Niamul Bari, A. Unggul Prianto...