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» Object correspondence as a machine learning problem
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BIBE
2008
IEEE
160views Bioinformatics» more  BIBE 2008»
15 years 6 months ago
Parallel integration of heterogeneous genome-wide data sources
— Heterogeneous genome-wide data sources capture information on various aspects of complex biological systems. For instance, transcriptome, interactome and phenome-level informat...
Derek Greene, Kenneth Bryan, Padraig Cunningham
CIDR
2003
106views Algorithms» more  CIDR 2003»
15 years 1 months ago
Speculative Query Processing
Speculation is an every day phenomenon whereby one acts in anticipation of particular conditions that are likely to hold in the future. Computer science research has seen many suc...
Neoklis Polyzotis, Yannis E. Ioannidis
BMCBI
2010
162views more  BMCBI 2010»
14 years 11 months ago
Moara: a Java library for extracting and normalizing gene and protein mentions
Background: Gene/protein recognition and normalization are important preliminary steps for many biological text mining tasks, such as information retrieval, protein-protein intera...
Mariana L. Neves, José María Carazo,...
BMCBI
2006
127views more  BMCBI 2006»
14 years 11 months ago
Automatic discovery of cross-family sequence features associated with protein function
Background: Methods for predicting protein function directly from amino acid sequences are useful tools in the study of uncharacterised protein families and in comparative genomic...
Markus Brameier, Josien Haan, Andrea Krings, Rober...
BMCBI
2005
125views more  BMCBI 2005»
14 years 11 months ago
A simple approach for protein name identification: prospects and limits
Background: Significant parts of biological knowledge are available only as unstructured text in articles of biomedical journals. By automatically identifying gene and gene produc...
Katrin Fundel, Daniel Güttler, Ralf Zimmer, J...