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WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
15 years 2 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
HM
2007
Springer
137views Optimization» more  HM 2007»
15 years 3 months ago
A Hybrid VNS for Connected Facility Location
The connected facility location (ConFL) problem generalizes the facility location problem and the Steiner tree problem in graphs. Given a graph G = (V, E), a set of customers D ⊆...
Ivana Ljubic
ALGOSENSORS
2009
Springer
15 years 4 months ago
A Note on Uniform Power Connectivity in the SINR Model
In this paper we study the connectivity problem for wireless networks under the Signal to Interference plus Noise Ratio (SINR) model. Given a set of radio transmitters distributed ...
Chen Avin, Zvi Lotker, Francesco Pasquale, Yvonne ...
ICPP
2006
IEEE
15 years 3 months ago
Parallel Algorithms for Evaluating Centrality Indices in Real-world Networks
This paper discusses fast parallel algorithms for evaluating several centrality indices frequently used in complex network analysis. These algorithms have been optimized to exploi...
David A. Bader, Kamesh Madduri
90
Voted
BMCBI
2008
226views more  BMCBI 2008»
14 years 9 months ago
ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining
Background: New systems biology studies require researchers to understand how interplay among myriads of biomolecular entities is orchestrated in order to achieve high-level cellu...
Tianxiao Huan, Andrey Y. Sivachenko, Scott H. Harr...