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» On Complexity Measures for Biological Sequences
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BMCBI
2006
166views more  BMCBI 2006»
14 years 11 months ago
Extraction of phylogenetic network modules from the metabolic network
Background: In bio-systems, genes, proteins and compounds are related to each other, thus forming complex networks. Although each organism has its individual network, some organis...
Takuji Yamada, Minoru Kanehisa, Susumu Goto
SISAP
2008
IEEE
175views Data Mining» more  SISAP 2008»
15 years 5 months ago
Anytime K-Nearest Neighbor Search for Database Applications
Many contemporary database applications require similarity-based retrieval of complex objects where the only usable knowledge of its domain is determined by a metric distance func...
Weijia Xu, Daniel P. Miranker, Rui Mao, Smriti R. ...
WAW
2007
Springer
144views Algorithms» more  WAW 2007»
15 years 5 months ago
Approximating Betweenness Centrality
Betweenness is a centrality measure based on shortest paths, widely used in complex network analysis. It is computationally-expensive to exactly determine betweenness; currently th...
David A. Bader, Shiva Kintali, Kamesh Madduri, Mil...
GECCO
2005
Springer
150views Optimization» more  GECCO 2005»
15 years 4 months ago
A GA for maximum likelihood phylogenetic inference using neighbour-joining as a genotype to phenotype mapping
Evolutionary relationships among species can be represented by a phylogenetic tree and inferred by optimising some measure of fitness, such as the statistical likelihood of the t...
Leon Poladian
POS
1998
Springer
15 years 3 months ago
Spatio-temporal Access in Persistent Java
Persistent programming languages are targetted primarily at application systems involving complex data structures and relationships, as typi ed by Geographical Information Systems...
Sonia Berman, R. Southern, A. Vasey, D. Ziskind