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» On Complexity Measures for Biological Sequences
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EDBT
2009
ACM
277views Database» more  EDBT 2009»
15 years 2 months ago
G-hash: towards fast kernel-based similarity search in large graph databases
Structured data including sets, sequences, trees and graphs, pose significant challenges to fundamental aspects of data management such as efficient storage, indexing, and simila...
Xiaohong Wang, Aaron M. Smalter, Jun Huan, Gerald ...
BMCBI
2010
96views more  BMCBI 2010»
14 years 9 months ago
QTLminer: identifying genes regulating quantitative traits
Background: Quantitative trait locus (QTL) mapping identifies genomic regions that likely contain genes regulating a quantitative trait. However, QTL regions may encompass tens to...
Rudi Alberts, Klaus Schughart
BMCBI
2006
114views more  BMCBI 2006»
14 years 9 months ago
A direct comparison of protein interaction confidence assignment schemes
Background: Recent technological advances have enabled high-throughput measurements of protein-protein interactions in the cell, producing large protein interaction networks for v...
Silpa Suthram, Tomer Shlomi, Eytan Ruppin, Roded S...
BMCBI
2008
98views more  BMCBI 2008»
14 years 9 months ago
GBNet: Deciphering regulatory rules in the co-regulated genes using a Gibbs sampler enhanced Bayesian network approach
Background: Combinatorial regulation of transcription factors (TFs) is important in determining the complex gene expression patterns particularly in higher organisms. Deciphering ...
Li Shen, Jie Liu, Wei Wang
COMCOM
2004
110views more  COMCOM 2004»
14 years 9 months ago
On the latency and fairness characteristics of pre-order deficit round Robin
In the emerging high-speed packet-switched networks, fair packet scheduling algorithms in switches and routers will form an important component of the mechanisms that seek to sati...
Salil S. Kanhere, Harish Sethu