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» On Complexity Measures for Biological Sequences
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FASE
2005
Springer
15 years 4 months ago
Coverage Criteria for Testing of Object Interactions in Sequence Diagrams
This work defines several control-flow coverage criteria for testing the interactions among a set of collaborating objects. The criteria are based on UML sequence diagrams that a...
Atanas Rountev, Scott Kagan, Jason Sawin
GECCO
2004
Springer
137views Optimization» more  GECCO 2004»
15 years 4 months ago
Evolving Better Multiple Sequence Alignments
Aligning multiple DNA or protein sequences is a fundamental step in the analyses of phylogeny, homology and molecular structure. Heuristic algorithms are applied because optimal mu...
Luke Sheneman, James A. Foster
80
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RECOMB
2006
Springer
15 years 11 months ago
Sorting by Translocations Via Reversals Theory
Abstract. The understanding of genome rearrangements is an important endeavor in comparative genomics. A major computational problem in this field is finding a shortest sequence of...
Michal Ozery-Flato, Ron Shamir
ASM
2008
ASM
15 years 1 months ago
A Concept-Driven Construction of the Mondex Protocol Using Three Refinements
Abstract. The Mondex case study concerns the formal development and verification of an electronic purse protocol. Several groups have worked on its specification and mechanical ver...
Gerhard Schellhorn, Richard Banach
ICDM
2006
IEEE
153views Data Mining» more  ICDM 2006»
15 years 5 months ago
k-STARs: Sequences of Spatio-Temporal Association Rules
A Spatio-Temporal Association Rule (STAR) describes how objects move between regions over time. Since they describe only a single movement between two regions, it is very difficu...
Florian Verhein