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» On Complexity of Easy Predictable Sequences
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ICANN
2001
Springer
15 years 4 months ago
Online Symbolic-Sequence Prediction with Discrete-Time Recurrent Neural Networks
This paper studies the use of discrete-time recurrent neural networks for predicting the next symbol in a sequence. The focus is on online prediction, a task much harder than the c...
Juan Antonio Pérez-Ortiz, Jorge Calera-Rubi...
113
Voted
BMCBI
2004
196views more  BMCBI 2004»
15 years 8 days ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
BMCBI
2008
57views more  BMCBI 2008»
15 years 15 days ago
A novel method for high accuracy sumoylation site prediction from protein sequences
Background: Protein sumoylation is an essential dynamic, reversible post translational modification that plays a role in dozens of cellular activities, especially the regulation o...
Jialin Xu, Yun He, Boqin Qiang, Jiangang Yuan, Xia...
107
Voted
BMCBI
2007
153views more  BMCBI 2007»
15 years 15 days ago
Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
Background: In ribonucleic acid (RNA) molecules whose function depends on their final, folded three-dimensional shape (such as those in ribosomes or spliceosome complexes), the se...
Amelia B. Bellamy-Royds, Marcel Turcotte
BMCBI
2008
134views more  BMCBI 2008»
15 years 15 days ago
Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites
Background: Utilization of alternative initiation sites for protein translation directed by non-AUG codons in mammalian mRNAs is observed with increasing frequency. Alternative in...
Jill L. Wegrzyn, Thomas M. Drudge, Faramarz Valafa...