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» On Compressibility of Protein Sequences
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84
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ISMB
2000
15 years 2 months ago
Integrative Analysis of Protein Interaction Data
We have developed a method for the integrative analysis of protein interaction data. It comprises clustering, visualization and data integration components. The method is generall...
Matthias Fellenberg, Kaj Albermann, Alfred Zollner...
80
Voted
CANDC
2008
ACM
15 years 23 days ago
In silico identification of the protein disulfide isomerase family from a protozoan parasite
Protein disulfide isomerase (PDI) enzymes are eukaryotic oxidoreductases that catalyze the correct formation of disulfide bonds during protein folding. Structurally they are chara...
Marco A. Ramos, Rosa E. Mares, Paloma D. Maga&ntil...
107
Voted
JCB
2000
107views more  JCB 2000»
15 years 14 days ago
A Discriminative Framework for Detecting Remote Protein Homologies
A new method for detecting remote protein homologies is introduced and shown to perform well in classifying protein domains by SCOP superfamily. The method is a variant of support...
Tommi Jaakkola, Mark Diekhans, David Haussler
86
Voted
NAR
2000
120views more  NAR 2000»
15 years 13 days ago
SCOP: a Structural Classification of Proteins database
The Structural Classification of Proteins (SCOP) database provides a detailed and comprehensive description of the relationships of all known proteins structures. The classificati...
Loredana Lo Conte, Bart Ailey, Tim J. P. Hubbard, ...
BMCBI
2010
153views more  BMCBI 2010»
15 years 24 days ago
Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction
Background: Structural variations caused by a wide range of physico-chemical and biological sources directly influence the function of a protein. For enzymatic proteins, the struc...
Drew H. Bryant, Mark Moll, Brian Y. Chen, Viachesl...