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BMCBI
2007
112views more  BMCBI 2007»
15 years 4 months ago
PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
Background: By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to ...
Daniel R. Caffrey, Paul H. Dana, Vidhya Mathur, Ma...
ICPR
2002
IEEE
16 years 5 months ago
Building the Topological Tree by Recursive FCM Color Clustering
In this paper we define a Topological Tree (TT) as a knowledge representation method that aims to describe important visual and spatial features of image regions, namely the color...
Rita Cucchiara, Costantino Grana, Andrea Prati, St...
NIPS
2008
15 years 6 months ago
Efficient Inference in Phylogenetic InDel Trees
Accurate and efficient inference in evolutionary trees is a central problem in computational biology. While classical treatments have made unrealistic site independence assumption...
Alexandre Bouchard-Côté, Michael I. J...
PPSN
2010
Springer
15 years 3 months ago
Fixed Parameter Evolutionary Algorithms and Maximum Leaf Spanning Trees: A Matter of Mutation
Abstract. Evolutionary algorithms have been shown to be very successful for a wide range of NP-hard combinatorial optimization problems. We investigate the NP-hard problem of compu...
Stefan Kratsch, Per Kristian Lehre, Frank Neumann,...
JMLR
2010
118views more  JMLR 2010»
14 years 11 months ago
Exploiting Within-Clique Factorizations in Junction-Tree Algorithms
It is probably fair to say that exact inference in graphical models is considered a solved problem, at least regarding its computational complexity: it is exponential in the treew...
Julian John McAuley, Tibério S. Caetano