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» On Finding Large Conjunctive Clusters
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BMCBI
2006
126views more  BMCBI 2006»
14 years 12 months ago
Effect of data normalization on fuzzy clustering of DNA microarray data
Background: Microarray technology has made it possible to simultaneously measure the expression levels of large numbers of genes in a short time. Gene expression data is informati...
Seo Young Kim, Jae Won Lee, Jong Sung Bae
NIPS
2008
15 years 1 months ago
Clusters and Coarse Partitions in LP Relaxations
We propose a new class of consistency constraints for Linear Programming (LP) relaxations for finding the most probable (MAP) configuration in graphical models. Usual cluster-base...
David Sontag, Amir Globerson, Tommi Jaakkola
IJPP
2008
74views more  IJPP 2008»
14 years 12 months ago
Bandwidth Efficient All-to-All Broadcast on Switched Clusters
We develop an all-to-all broadcast scheme that achieves maximum bandwidth efficiency for clusters with tree topologies. Using our scheme for clusters with cut-through switches, an...
Ahmad Faraj, Pitch Patarasuk, Xin Yuan
CGF
2010
118views more  CGF 2010»
14 years 12 months ago
The Readability of Path-Preserving Clusterings of Graphs
Graph visualization systems often exploit opaque metanodes to reduce visual clutter and improve the readability of large graphs. This filtering can be done in a path-preserving wa...
Daniel Archambault, Helen C. Purchase, Bruno Pinau...
BMCBI
2010
125views more  BMCBI 2010»
14 years 12 months ago
NeatMap - non-clustering heat map alternatives in R
Background: The clustered heat map is the most popular means of visualizing genomic data. It compactly displays a large amount of data in an intuitive format that facilitates the ...
Satwik Rajaram, Yoshi Oono