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» On Genetic Algorithms and Lindenmayer Systems
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CIKM
2006
Springer
15 years 3 months ago
Validating associations in biological databases
To cope with the large amount of biological sequences being produced, a significant number of genes and proteins have been annotated by automated tools. A protein annotation is an...
Francisco M. Couto, Mário J. Silva, Pedro C...
PPSN
2000
Springer
15 years 3 months ago
Optimizing through Co-evolutionary Avalanches
Abstract. We explore a new general-purpose heuristic for nding highquality solutions to hard optimization problems. The method, called extremal optimization, is inspired by self-or...
Stefan Boettcher, Allon G. Percus, Michelangelo Gr...
BMCBI
2006
113views more  BMCBI 2006»
14 years 11 months ago
QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyp
Background: Single nucleotide polymorphisms (SNPs) are important tools in studying complex genetic traits and genome evolution. Computational strategies for SNP discovery make use...
Jifeng Tang, Ben Vosman, Roeland E. Voorrips, C. G...
BMCBI
2007
111views more  BMCBI 2007»
14 years 11 months ago
MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs
Background: A combination of multiple types of transcription factors and cis-regulatory elements is often required for gene expression in eukaryotes, and the combinatorial regulat...
Mamoru Kato, Tatsuhiko Tsunoda
IVC
2007
91views more  IVC 2007»
14 years 11 months ago
Evolutionary approach to inverse planning in coplanar radiotherapy
A unified evolutionary approach to coplanar radiotherapy inverse planning is proposed. It consists of a genetic algorithm-based framework that solves with little modification tr...
Vitoantonio Bevilacqua, Giuseppe Mastronardi, Gius...