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CPM
2004
Springer
144views Combinatorics» more  CPM 2004»
15 years 3 months ago
A Simple Optimal Representation for Balanced Parentheses
We consider succinct, or highly space-efficient, representations of a (static) string consisting of n pairs of balanced parentheses, that support natural operations such as findi...
Richard F. Geary, Naila Rahman, Rajeev Raman, Venk...
ICSE
2001
IEEE-ACM
15 years 2 months ago
Encoding Program Executions
Dynamic analysis is based on collecting data as the program runs. However, raw traces tend to be too voluminous and too unstructured to be used directly for visualization and unde...
Steven P. Reiss, Manos Renieris
ZUM
1997
Springer
125views Formal Methods» more  ZUM 1997»
15 years 1 months ago
A Formal OO Method Inspired by Fusion and Object-Z
We present a new formal OO method, called FOX, which is a synergetic combination of the semi-formal Fusion method and the formal specification language Object-Z. To manage complex...
Klaus Achatz, Wolfram Schulte
62
Voted
ISMB
2000
14 years 11 months ago
An Evaluation of Ontology Exchange Languages for Bioinformatics
Ontologies are specifications of the concepts in a given field, and of the relationships among those concepts. The development of ontologies for molecular-biology information and ...
Robin McEntire, Peter D. Karp, Neil F. Abernethy, ...
76
Voted
BMCBI
2006
101views more  BMCBI 2006»
14 years 9 months ago
Hierarchical modularity of nested bow-ties in metabolic networks
Background: The exploration of the structural topology and the organizing principles of genomebased large-scale metabolic networks is essential for studying possible relations bet...
Jing Zhao, Hong Yu, Jianhua Luo, Zhi-Wei Cao, Yi-X...