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BIOSYSTEMS
2007
115views more  BIOSYSTEMS 2007»
15 years 3 months ago
Evolving fuzzy rules to model gene expression
This paper develops an algorithm that extracts explanatory rules from microarray data, which we treat as time series, using genetic programming (GP) and fuzzy logic. Reverse polis...
Ricardo Linden, Amit Bhaya
BMCBI
2010
123views more  BMCBI 2010»
15 years 3 months ago
Computationally efficient flux variability analysis
Background: Flux variability analysis is often used to determine robustness of metabolic models in various simulation conditions. However, its use has been somehow limited by the ...
Steinn Gudmundsson, Ines Thiele
BMCBI
2008
83views more  BMCBI 2008»
15 years 3 months ago
A Java-based tool for the design of classification microarrays
Background: Classification microarrays are used for purposes such as identifying strains of bacteria and determining genetic relationships to understand the epidemiology of an inf...
Da Meng, Shira L. Broschat, Douglas R. Call
EOR
2008
75views more  EOR 2008»
15 years 3 months ago
Soft car sequencing with colors: Lower bounds and optimality proofs
This paper is a study of the car sequencing problem, when feature spacing constraints are soft and colors of vehicles are taken into account. Both pseudo-polynomial algorithms and ...
Thierry Benoist
119
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COMPUTER
2006
98views more  COMPUTER 2006»
15 years 3 months ago
Componentization: The Visitor Example
: In software design, laziness is a virtue: it's better to reuse than to redo. Design patterns are a good illustration. Patterns, a major advance in software architecture, pro...
Bertrand Meyer, Karine Arnout