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» On Multiple Linear Approximations
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92
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BMCBI
2005
101views more  BMCBI 2005»
14 years 11 months ago
PALSSE: A program to delineate linear secondary structural elements from protein structures
Background: The majority of residues in protein structures are involved in the formation of helices and -strands. These distinctive secondary structure patterns can be used to rep...
Indraneel Majumdar, S. Sri Krishna, Nick V. Grishi...
KDD
2006
ACM
213views Data Mining» more  KDD 2006»
15 years 11 months ago
Learning sparse metrics via linear programming
Calculation of object similarity, for example through a distance function, is a common part of data mining and machine learning algorithms. This calculation is crucial for efficie...
Glenn Fung, Rómer Rosales
IPPS
2006
IEEE
15 years 5 months ago
Memory minimization for tensor contractions using integer linear programming
This paper presents a technique for memory optimization for a class of computations that arises in the field of correlated electronic structure methods such as coupled cluster and...
A. Allam, J. Ramanujam, Gerald Baumgartner, P. Sad...
86
Voted
BMCBI
2007
173views more  BMCBI 2007»
14 years 11 months ago
Predicting state transitions in the transcriptome and metabolome using a linear dynamical system model
Background: Modelling of time series data should not be an approximation of input data profiles, but rather be able to detect and evaluate dynamical changes in the time series dat...
Ryoko Morioka, Shigehiko Kanaya, Masami Y. Hirai, ...
SIAMSC
2008
179views more  SIAMSC 2008»
14 years 11 months ago
Multigrid Algorithms for Inverse Problems with Linear Parabolic PDE Constraints
Abstract. We present a multigrid algorithm for the solution of distributed parameter inverse problems constrained by variable-coefficient linear parabolic partial differential equa...
Santi S. Adavani, George Biros