Correlated motif mining (CMM) is the problem to find overrepresented pairs of patterns, called motif pairs, in interacting protein sequences. Algorithmic solutions for CMM thereb...
Peter Boyen, Frank Neven, Dries Van Dyck, Aalt-Jan...
Abstract. Protein structural alignment is an indispensable tool used for many different studies in bioinformatics. Most structural alignment algorithms assume that the structural ...
Joe Dundas, T. Andrew Binkowski, Bhaskar DasGupta,...
Since the 9/11 terrorist attacks, the effective and efficient protection of critical information infrastructures has become an even more important issue. To enhance network surviv...
We consider the problem of finding pairs of short patterns such that, in a given input sequence of length n, the distance between each pair’s patterns is at least α. The proble...
The problem of global state observation is fundamental to distributed systems and to the analysis of data streams. Many interactions in distributed systems can be analyzed in term...