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» On Relating Heterogeneous Elements from Different Ontologies
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BMCBI
2007
120views more  BMCBI 2007»
14 years 10 months ago
Non-coding sequence retrieval system for comparative genomic analysis of gene regulatory elements
Background: Completion of the human genome sequence along with other species allows for greater understanding of the biochemical mechanisms and processes that govern healthy as we...
Sung Tae Doh, Yunyu Zhang, Matthew H. Temple, Li C...
BMCBI
2008
106views more  BMCBI 2008»
14 years 10 months ago
Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology
Background: Bio-ontologies are key elements of knowledge management in bioinformatics. Rich and rigorous bio-ontologies should represent biological knowledge with high fidelity an...
Mikel Egaña Aranguren, Erick Antezana, Mart...
TSMC
2008
136views more  TSMC 2008»
14 years 9 months ago
Learning Relational Descriptions of Differentially Expressed Gene Groups
Abstract-- This paper presents a method that uses gene ontologies, together with the paradigm of relational subgroup discovery, to find compactly described groups of genes differen...
Igor Trajkovski, Filip Zelezný, Nada Lavrac...
MTSR
2007
Springer
15 years 4 months ago
Creating and Querying an Integrated Ontology for Molecular and Phenotypic Cereals Data
In this paper we describe the development of an ontology of molecular and phenotypic cereals data, realized by integrating existing public web databases with the database developed...
Sonia Bergamaschi, Antonio Sala 0002
BMCBI
2007
96views more  BMCBI 2007»
14 years 10 months ago
Features generated for computational splice-site prediction correspond to functional elements
Background: Accurate selection of splice sites during the splicing of precursors to messenger RNA requires both relatively well-characterized signals at the splice sites and auxil...
Rezarta Islamaj Dogan, Lise Getoor, W. John Wilbur...