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» On Sorting Permutations by Double-Cut-and-Joins
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TCOM
2010
114views more  TCOM 2010»
14 years 4 months ago
Concentric Permutation Source Codes
Permutation codes are a class of structured vector quantizers with a computationally-simple encoding procedure based on sorting the scalar components. Using a codebook comprising s...
Ha Q. Nguyen, Lav R. Varshney, Vivek K. Goyal
EJC
2010
14 years 9 months ago
Descent polynomials for permutations with bounded drop size
Abstract. Motivated by juggling sequences and bubble sort, we examine permutations on the set {1, 2, . . . , n} with d descents and maximum drop size k. We give explicit formulas f...
Fan R. K. Chung, Anders Claesson, Mark Dukes, Rona...
JDA
2008
122views more  JDA 2008»
14 years 9 months ago
An approximation algorithm for sorting by reversals and transpositions
Abstract. Genome rearrangement algorithms are powerful tools to analyze gene orders in molecular evolution. Analysis of genomes evolving by reversals and transpositions leads to a ...
Atif Rahman, Swakkhar Shatabda, Masud Hasan
CPM
2004
Springer
107views Combinatorics» more  CPM 2004»
15 years 1 months ago
Sorting by Reversals in Subquadratic Time
The problem of sorting a signed permutation by reversals is inspired by genome rearrangements in computational molecular biology. Given two genomes represented as two signed permut...
Eric Tannier, Marie-France Sagot
COCOON
2005
Springer
15 years 3 months ago
Perfect Sorting by Reversals
In computational biology, gene order data is often modelled as signed permutations. A classical problem in genome comparison is to detect conserved segments in a permutation, that ...
Marie-France Sagot, Eric Tannier