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» On String Matching in Chunked Texts
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126
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BMCBI
2002
120views more  BMCBI 2002»
15 years 5 days ago
tacg - a grep for DNA
Background: Pattern matching is the core of bioinformatics; it is used in database searching, restriction enzyme mapping, and finding open reading frames. It is done repeatedly ov...
Harry Mangalam
117
Voted
BMCBI
2006
154views more  BMCBI 2006»
15 years 12 days ago
Automated recognition of malignancy mentions in biomedical literature
Background: The rapid proliferation of biomedical text makes it increasingly difficult for researchers to identify, synthesize, and utilize developed knowledge in their fields of ...
Yang Jin, Ryan T. McDonald, Kevin Lerman, Mark A. ...
LATA
2010
Springer
15 years 5 months ago
A Randomized Numerical Aligner (rNA)
With the advent of new sequencing technologies able to produce an enormous quantity of short genomic sequences, new tools able to search for them inside a references sequence genom...
Alberto Policriti, Alexandru I. Tomescu, Francesco...
BMCBI
2007
124views more  BMCBI 2007»
15 years 11 days ago
Protein structural similarity search by Ramachandran codes
Background: Protein structural data has increased exponentially, such that fast and accurate tools are necessary to access structure similarity search. To improve the search speed...
Wei-Cheng Lo, Po-Jung Huang, Chih-Hung Chang, Ping...
117
Voted
EACL
2009
ACL Anthology
14 years 10 months ago
Improving Grammaticality in Statistical Sentence Generation: Introducing a Dependency Spanning Tree Algorithm with an Argument S
like text summarisation requires a means of producing novel summary sentences. In order to improve the grammaticality of the generated sentence, we model a global (sentence) level...
Stephen Wan, Mark Dras, Robert Dale, Cécile...