314 search results - page 10 / 63 » On Suboptimal Alignments of Biological Sequences |
111
click to vote
RECOMB
2006
Springer
15 years 12 months ago
2006
Springer
It is well known that the base composition along eukaryotic genomes is long-range correlated. Here, we investigate the effect of such long-range correlations on alignment score sta...
AINA
2008
IEEE
15 years 6 months ago
2008
IEEE
The common-use gap penalty strategies, constant penalty and affine gap penalty, have been adopted in the traditional three-sequence alignment algorithm which considers the inserti...
85
Voted
RECOMB
2004
Springer
15 years 12 months ago
2004
Springer
We have developed a multiple genome alignment algorithm by using a sequence clustering algorithm to combine local pairwise genome sequence matches produced by pairwise genome align...
BMCBI
2008
14 years 11 months ago
2008
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
100
Voted
NAR
2006
14 years 11 months ago
2006
Multiple sequence alignment programs are an invaluable tool in computational biology. A-Bruijn Alignment (ABA) is a method for multiple sequence alignment that represents an align...