314 search results - page 10 / 63 » On Suboptimal Alignments of Biological Sequences |
129
Voted
RECOMB
2006
Springer
16 years 2 months ago
2006
Springer
It is well known that the base composition along eukaryotic genomes is long-range correlated. Here, we investigate the effect of such long-range correlations on alignment score sta...
103
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AINA
2008
IEEE
15 years 8 months ago
2008
IEEE
The common-use gap penalty strategies, constant penalty and affine gap penalty, have been adopted in the traditional three-sequence alignment algorithm which considers the inserti...
102
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RECOMB
2004
Springer
16 years 2 months ago
2004
Springer
We have developed a multiple genome alignment algorithm by using a sequence clustering algorithm to combine local pairwise genome sequence matches produced by pairwise genome align...
114
Voted
BMCBI
2008
15 years 2 months ago
2008
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
125
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NAR
2006
15 years 1 months ago
2006
Multiple sequence alignment programs are an invaluable tool in computational biology. A-Bruijn Alignment (ABA) is a method for multiple sequence alignment that represents an align...