314 search results - page 15 / 63 » On Suboptimal Alignments of Biological Sequences |
CISIS
2010
IEEE
15 years 5 months ago
2010
IEEE
—A new parallel programming framework for DNA sequence alignment in homogeneous multi-core processor architectures is proposed. Contrasting with traditional coarse-grained parall...
100
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CONSTRAINTS
2008
14 years 11 months ago
2008
Aligning DNA and protein sequences is a core technique in molecular biology. Often, it is desirable to include partial prior knowledge and conditions in an alignment. Going beyond...
BIBE
2005
IEEE
15 years 5 months ago
2005
IEEE
We propose two novel dynamic programming (DP) methods that solve the the approximate bounded and unbounded global alignment problems for biological sequences. Our first method so...
CSB
2005
IEEE
15 years 5 months ago
2005
IEEE
We present TreeRefiner, a tool for refining multiple alignments of biological sequences. Given a multiple alignment, a phylogenetic tree, and scoring parameters as input, TreeRefi...
103
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BMCBI
2010
14 years 11 months ago
2010
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...