314 search results - page 34 / 63 » On Suboptimal Alignments of Biological Sequences |
114
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TCBB
2010
14 years 10 months ago
2010
— We describe a theoretical unifying framework to express comparison of RNA structures, which we call alignment hierarchy. This framework relies on the definition of common supe...
104
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BMCBI
2006
14 years 11 months ago
2006
Background: Molecular evolutionary studies of noncoding sequences rely on multiple alignments. Yet how multiple alignment accuracy varies across sequence types, tree topologies, d...
RECOMB
2009
Springer
16 years 11 days ago
2009
Springer
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...
99
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HPDC
2010
IEEE
15 years 26 days ago
2010
IEEE
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
RECOMB
2003
Springer
16 years 2 days ago
2003
Springer
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...