314 search results - page 34 / 63 » On Suboptimal Alignments of Biological Sequences |
127
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TCBB
2010
15 years 9 days ago
2010
— We describe a theoretical unifying framework to express comparison of RNA structures, which we call alignment hierarchy. This framework relies on the definition of common supe...
123
Voted
BMCBI
2006
15 years 2 months ago
2006
Background: Molecular evolutionary studies of noncoding sequences rely on multiple alignments. Yet how multiple alignment accuracy varies across sequence types, tree topologies, d...
103
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RECOMB
2009
Springer
16 years 2 months ago
2009
Springer
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...
122
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HPDC
2010
IEEE
15 years 3 months ago
2010
IEEE
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
109
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RECOMB
2003
Springer
16 years 2 months ago
2003
Springer
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...