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» On Suboptimal Alignments of Biological Sequences
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NAR
2002
105views more  NAR 2002»
14 years 11 months ago
AraC-XylS database: a family of positive transcriptional regulators in bacteria
The AraC-XylS database contains information about a family of positive transcriptional regulators broadly distributed in bacteria. This specific database focuses on protein sequen...
Raquel Tobes, Juan L. Ramos
RECOMB
2005
Springer
16 years 3 days ago
Recognition of Binding Patterns Common to a Set of Protein Structures
We present a novel computational method, MultiBind, for recognition of binding patterns common to a set of protein structures. It is the first method which performs a multiple alig...
Maxim Shatsky, Alexandra Shulman-Peleg, Ruth Nussi...
BMCBI
2005
137views more  BMCBI 2005»
14 years 11 months ago
A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise
Background: Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topo...
Olivier Bastien, Philippe Ortet, Sylvaine Roy, Eri...
COMAD
2009
14 years 9 months ago
Similarity Search in Moving Object Trajectories
The continuous and rapid advent in mobile and communications technology opens the way for new research areas and new applications. Moving Object Databases(MODs) are among the emer...
Omnia Ossama Hoda, M. O. Mokhtar
RECOMB
2002
Springer
16 years 3 days ago
Comparison of minisatellites
In the class of repeated sequences that occur in DNA, minisatellites have been found polymorphic and became useful tools in genetic mapping and forensic studies. They consist of a...
Eric Rivals, Sèverine Bérard