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    » On Suboptimal Alignments of Biological Sequences
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    BIBM
    2009
    IEEE
    206views Bioinformatics» more  BIBM 2009»
    ChemAlign: Biologically Relevant Multiple Sequence Alignment Using Physicochemical Properties
    15 years 6 months ago
    ChemAlign: Biologically Relevant Multiple Sequence Alignment Using Physicochemical Properties
    Download  www.ncbi.nlm.nih.gov
    —We present a new algorithm, ChemAlign, that uses physicochemical properties and secondary structure elements to create biologically relevant multiple sequence alignments (MSAs)....
    Hyrum Carroll, Mark J. Clement, Quinn Snell, David...
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    BMCBI
    2005
    158views more  BMCBI 2005»
    Automated generation of heuristics for biological sequence comparison
    14 years 11 months ago
    Automated generation of heuristics for biological sequence comparison
    Download  www.biomedcentral.com
    Background: Exhaustive methods of sequence alignment are accurate but slow, whereas heuristic approaches run quickly, but their complexity makes them more difficult to implement. ...
    Guy St. C. Slater, Ewan Birney
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    ECCB
    2002
    IEEE
    107views Computational Biology» more  ECCB 2002»
    Contextual alignment of biological sequences
    15 years 4 months ago
    Contextual alignment of biological sequences
    Download  bioinformatics.oxfordjournals.org
    Anna Gambin, Slawomir Lasota, Radoslaw Szklarczyk,...
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    BICOB
    2009
    Springer
    109views Computational Biology» more  BICOB 2009»
    Multiple Sequence Alignment System for Pyrosequencing Reads
    15 years 6 months ago
    Multiple Sequence Alignment System for Pyrosequencing Reads
    Download  www.camda2009.org
    Fahad Saeed, Ashfaq A. Khokhar, Osvaldo Zagordi, N...
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    ISMB
    1998
    76views Computational Biology» more  ISMB 1998»
    Segment-Based Scores for Pairwise and Multiple Sequence Alignments
    15 years 1 months ago
    Segment-Based Scores for Pairwise and Multiple Sequence Alignments
    Download  www.aaai.org
    Burkhard Morgenstern, William R. Atchley, Klaus Ha...
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