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» On Suboptimal Alignments of Biological Sequences
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BMCBI
2010
123views more  BMCBI 2010»
14 years 12 months ago
A new protein binding pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction
Background: Predicting which molecules can bind to a given binding site of a protein with known 3D structure is important to decipher the protein function, and useful in drug desi...
Brice Hoffmann, Mikhail Zaslavskiy, Jean-Philippe ...
BMCBI
2011
14 years 6 months ago
R2R - software to speed the depiction of aesthetic consensus RNA secondary structures
Background: With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these mol...
Zasha Weinberg, Ronald R. Breaker
GECCO
1999
Springer
15 years 4 months ago
Reaction Temperature Constraints in DNA Computing
Using the thermodynamics of DNA melting, a technique is proposed to choose a reaction temperature for the DNA computation that minimizes the potential for mishybridizations. Adlem...
Russell J. Deaton
MICCAI
2007
Springer
16 years 23 days ago
A Bayesian 3D Volume Reconstruction for Confocal Micro-rotation Cell Imaging
Abstract. Recently, micro-rotation confocal microscopy has enabled the acquisition of a sequence of slices for a non-adherent living cells where the slices' positions are roug...
Alain Trouvé, Bernard Chalmond, Yong Yu
ECML
2006
Springer
15 years 3 months ago
PAC-Learning of Markov Models with Hidden State
The standard approach for learning Markov Models with Hidden State uses the Expectation-Maximization framework. While this approach had a significant impact on several practical ap...
Ricard Gavaldà, Philipp W. Keller, Joelle P...