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» On contract-and-refine transformations between phylogenetic ...
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73
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SODA
2004
ACM
124views Algorithms» more  SODA 2004»
14 years 11 months ago
On contract-and-refine transformations between phylogenetic trees
The inference of evolutionary trees using approaches which attempt to solve the maximum parsimony (MP) and maximum likelihood (ML) optimization problems is a standard part of much...
Ganeshkumar Ganapathy, Vijaya Ramachandran, Tandy ...
95
Voted
CPM
2004
Springer
84views Combinatorics» more  CPM 2004»
15 years 3 months ago
Small Phylogeny Problem: Character Evolution Trees
Abstract. Phylogenetics is a science of determining connections between groups of organisms in terms of ancestor/descendent relationships, usually expressed by phylogenetic trees, ...
Arvind Gupta, Ján Manuch, Ladislav Stacho, ...
76
Voted
BMCBI
2007
95views more  BMCBI 2007»
14 years 10 months ago
Phylogenetic tree information aids supervised learning for predicting protein-protein interaction based on distance matrices
Background: Protein-protein interactions are critical for cellular functions. Recently developed computational approaches for predicting protein-protein interactions utilize co-ev...
Roger A. Craig, Li Liao
124
Voted
BMCBI
2011
14 years 5 months ago
Bio: : Phylo - phyloinformatic analysis using Perl
Background: Phyloinformatic analyses involve large amounts of data and metadata of complex structure. Collecting, processing, analyzing, visualizing and summarizing these data and...
Rutger A. Vos, Jason Caravas, Klaas Hartmann, Mark...