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» On counting homomorphisms to directed acyclic graphs
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JACM
2007
113views more  JACM 2007»
15 years 5 days ago
On counting homomorphisms to directed acyclic graphs
Martin E. Dyer, Leslie Ann Goldberg, Mike Paterson
BIBE
2007
IEEE
145views Bioinformatics» more  BIBE 2007»
15 years 6 months ago
Homomorphisms of Multisource Trees into Networks with Applications to Metabolic Pathways
Network mapping is a convenient tool for comparing and exploring biological networks; it can be used for predicting unknown pathways, fast and meaningful searching of databases, a...
Qiong Cheng, Robert W. Harrison, Alexander Zelikov...
DAM
2007
97views more  DAM 2007»
15 years 7 days ago
On Sturmian graphs
In this paper we define Sturmian graphs and we prove that all of them have a certain “counting” property. We show deep connections between this counting property and two conj...
Chiara Epifanio, Filippo Mignosi, Jeffrey Shallit,...
COCOA
2007
Springer
15 years 6 months ago
On Threshold BDDs and the Optimal Variable Ordering Problem
Abstract. Many combinatorial optimization problems can be formulated as 0/1 integer programs (0/1 IPs). The investigation of the structure of these problems raises the following ta...
Markus Behle
CPM
1993
Springer
154views Combinatorics» more  CPM 1993»
15 years 4 months ago
On Suboptimal Alignments of Biological Sequences
It is widely accepted that the optimal alignment between a pair of proteins or nucleic acid sequences that minimizes the edit distance may not necessarily re ect the correct biolog...
Dalit Naor, Douglas L. Brutlag