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» On error-tolerant DNA screening
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DM
2008
100views more  DM 2008»
14 years 9 months ago
Adaptive group testing for consecutive positives
Motivated from an application to DNA library screening, Balding and Torney [1] and Colbourn [4] studied the following group testing for consecutive positives. Suppose Vn = {v1 v2 ...
Justie Su-tzu Juan, Gerard J. Chang
NAR
2006
100views more  NAR 2006»
14 years 9 months ago
The LIFEdb database in 2006
LIFEdb (http://www.LIFEdb.de) integrates data from large-scale functional genomics assays and manual cDNA annotation with bioinformatics gene expression and protein analysis. New ...
Alexander Mehrle, Heiko Rosenfelder, Ingo Schupp, ...
ISMB
2000
14 years 11 months ago
A Practical Algorithm for Optimal Inference of Haplotypes from Diploid Populations
The next phase of human genomics will involve largescale screens of populations for signi cant DNA polymorphisms, notably single nucleotide polymorphisms SNP's. Dense human S...
Dan Gusfield
DM
2008
87views more  DM 2008»
14 years 9 months ago
More on pooling spaces
A pooling space is a ranked poset P such that the subposet w+ induced by the elements above w is atomic for each element w of P. Pooling spaces were introduced in [Discrete Mathem...
Hau-wen Huang, Yu-pei Huang, Chih-wen Weng
100
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BMCBI
2004
126views more  BMCBI 2004»
14 years 9 months ago
Visualization and analysis of microarray and gene ontology data with treemaps
Background: The increasing complexity of genomic data presents several challenges for biologists. Limited computer monitor views of data complexity and the dynamic nature of data ...
Eric H. Baehrecke, Niem Dang, Ketan Babaria, Ben S...