Background: Sequence comparison by alignment is a fundamental tool of molecular biology. In this paper we show how a number of sequence comparison tasks, including the detection o...
Bernhard Haubold, Nora Pierstorff, Friedrich M&oum...
We describe a new algorithm for protein classi cation and the detection of remote homologs. The rationale is to exploit both vertical and horizontal information of a multiple alig...
Stochastic local search (SLS) methods are underlying some of the best-performing algorithms for certain types of SAT instances, both from an empirical as well as from a theoretical...
Monotone systems of polynomial equations (MSPEs) are systems of fixed-point equations X1 = f1(X1, . . . , Xn), . . . , Xn = fn(X1, . . . , Xn) where each fi is a polynomial with p...
Stefan Kiefer, Michael Luttenberger, Javier Esparz...
Compressed sensing allows perfect recovery of sparse signals (or signals sparse in some basis) using only a small number of measurements. The results in the literature have focuse...
Dmitry M. Malioutov, Sujay Sanghavi, Alan S. Wills...