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» On numbers of Davenport-Schinzel sequences
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BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
15 years 7 months ago
Highly Scalable and Accurate Seeds for Subsequence Alignment
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Abhijit Pol, Tamer Kahveci
EDCC
1999
Springer
15 years 5 months ago
Considering Workload Input Variations in Error Coverage Estimation
The effects of variations in the workload input when estimating error detection coverage using fault injection are investigated. Results from scanchain implemented fault injection ...
Peter Folkesson, Johan Karlsson
IJIT
2004
15 years 3 months ago
Computing Entropy for Ortholog Detection
Abstract-- Biological sequences from different species are called orthologs if they evolved from a sequence of a common ancestor species and they have the same biological function....
Hsing-Kuo Pao, John Case
BMCBI
2010
96views more  BMCBI 2010»
15 years 1 months ago
ModuleOrganizer: detecting modules in families of transposable elements
Background: Most known eukaryotic genomes contain mobile copied elements called transposable elements. In some species, these elements account for the majority of the genome seque...
Sébastien Tempel, Christine Rousseau, Fariz...
BMCBI
2007
117views more  BMCBI 2007»
15 years 1 months ago
DNA-based watermarks using the DNA-Crypt algorithm
Background: The aim of this paper is to demonstrate the application of watermarks based on DNA sequences to identify the unauthorized use of genetically modified organisms (GMOs) ...
Dominik Heider, Angelika Barnekow