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» On numbers of Davenport-Schinzel sequences
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PPSC
1993
15 years 2 months ago
A Matrix Framework for Conjugate Gradient Methods and Some Variants of CG with Less Synchronization Overhead
We will present a matrix framework for the conjugate gradient methods, which is expressed in terms of whole vector sequences instead of single vectors or initial parts of sequence...
Eduardo F. D'Azevedo, Victor Eijkhout, Charles H. ...
BMCBI
2010
128views more  BMCBI 2010»
15 years 1 months ago
VIGOR, an annotation program for small viral genomes
Background: The decrease in cost for sequencing and improvement in technologies has made it easier and more common for the re-sequencing of large genomes as well as parallel seque...
Shiliang Wang, Jaideep P. Sundaram, David Spiro
BMCBI
2010
123views more  BMCBI 2010»
15 years 1 months ago
An improved classification of G-protein-coupled receptors using sequence-derived features
Background: G-protein-coupled receptors (GPCRs) play a key role in diverse physiological processes and are the targets of almost two-thirds of the marketed drugs. The 3 D structur...
Zhen-Ling Peng, Jian-Yi Yang, Xin Chen
136
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BMCBI
2008
132views more  BMCBI 2008»
15 years 1 months ago
The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes thr
Background: Data mining in large DNA sequences is a major challenge in microbial genomics and bioinformatics. Oligonucleotide usage (OU) patterns provide a wealth of information f...
Hamilton Ganesan, Anna S. Rakitianskaia, Colin F. ...
BMCBI
2005
80views more  BMCBI 2005»
15 years 1 months ago
Gene finding in the chicken genome
Background: Despite the continuous production of genome sequence for a number of organisms, reliable, comprehensive, and cost effective gene prediction remains problematic. This i...
Eduardo Eyras, Alexandre Reymond, Robert Castelo, ...