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» On numbers of Davenport-Schinzel sequences
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BMCBI
2006
165views more  BMCBI 2006»
15 years 1 months ago
Improving the quality of protein structure models by selecting from alignment alternatives
Background: In the area of protein structure prediction, recently a lot of effort has gone into the development of Model Quality Assessment Programs (MQAPs). MQAPs distinguish hig...
Ingolf Sommer, Stefano Toppo, Oliver Sander, Thoma...
BMCBI
2006
111views more  BMCBI 2006»
15 years 1 months ago
High throughput profile-profile based fold recognition for the entire human proteome
Background: In order to maintain the most comprehensive structural annotation databases we must carry out regular updates for each proteome using the latest profile-profile fold r...
Liam J. McGuffin, Richard T. Smith, Kevin Bryson, ...
BMCBI
2005
201views more  BMCBI 2005»
15 years 1 months ago
Principal component analysis for predicting transcription-factor binding motifs from array-derived data
Background: The responses to interleukin 1 (IL-1) in human chondrocytes constitute a complex regulatory mechanism, where multiple transcription factors interact combinatorially to...
Yunlong Liu, Matthew P. Vincenti, Hiroki Yokota
TKDE
2008
156views more  TKDE 2008»
15 years 1 months ago
A Framework for Mining Sequential Patterns from Spatio-Temporal Event Data Sets
Given a large spatio-temporal database of events, where each event consists of the fields event ID, time, location, and event type, mining spatio-temporal sequential patterns ident...
Yan Huang, Liqin Zhang, Pusheng Zhang
BMCBI
2004
158views more  BMCBI 2004»
15 years 1 months ago
Improvement of alignment accuracy utilizing sequentially conserved motifs
Background: Multiple sequence alignment algorithms are very important tools in molecular biology today. Accurate alignment of proteins is central to several areas such as homology...
Saikat Chakrabarti, Nitin Bhardwaj, Prem A. Anand,...