In genomic sequence analysis tasks like splice site recognition or promoter identification, large amounts of training sequences are available, and indeed needed to achieve suffici...
Many genomic sequences and, more generally, (multivariate) time series display tremendous variability. However, often it is reasonable to assume that the sequence is actually gene...
Cycle detection in graphs and digraphs has received wide attention and several algorithms are available for this purpose. While the web may be modeled as a digraph, such algorithm...
We propose a new discriminative framework, namely Hidden Dynamic Conditional Random Fields (HDCRFs), for building probabilistic models which can capture both internal and external...
Fix an element x of a finite partially ordered set P on n elements. Then let hi(x) be the number of linear extensions of P in which x is in position i, counting from the bottom. T...